You don't need a rear window they are the same with or without a vinyl, your rear window trim will cover the gap.Are you sure I don't need the rear window? The gap is pretty big when I took the vinyl off. I checked craigs lists and many other sites and I cannot find the quarter panel windows. I think I may have to purchase them new if that's possible. I'm sure its going to cost me way more then I thought.
The quarter windows and rubber molding are also the same and you could reuse them but you might never get the molding to lay flat again after being pushed out from the vinyl top for 30 years which would probably end up with a leak and as far as I know there are no aftermarket replacements but there could be.
You could post in the "Wanted" section on here someone might have some they would be willing to sell you.